Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g00237.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2673
ACGTcount: A:0.31, C:0.18, G:0.22, T:0.29


Found at i:455 original size:6 final size:6

Alignment explanation


    Indices: 444--470  Score: 54
    Period size: 6  Copynumber: 4.5  Consensus size: 6

        434 AAGATCAGAA

                                           
        444 AGAAAG AGAAAG AGAAAG AGAAAG AGA
          1 AGAAAG AGAAAG AGAAAG AGAAAG AGA

        471 GAAGCAACAA


Statistics
Matches: 21,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   21  1.00

ACGTcount: A:0.67, C:0.00, G:0.33, T:0.00


Consensus pattern (6 bp):   
AGAAAG

Done.