Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g00321.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2028
ACGTcount: A:0.31, C:0.19, G:0.22, T:0.28


Found at i:1601 original size:4 final size:4

Alignment explanation


    Indices: 1592--1625  Score: 68
    Period size: 4  Copynumber: 8.5  Consensus size: 4

       1582 CAATCAGGGA

                                                      
       1592 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC AT
          1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC AT

       1626 CTAAATTAGT


Statistics
Matches: 30,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   4   30  1.00

ACGTcount: A:0.50, C:0.24, G:0.00, T:0.26


Consensus pattern (4 bp):   
ATAC

Done.