Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g00363.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2903
ACGTcount: A:0.29, C:0.19, G:0.20, T:0.33


Found at i:246 original size:13 final size:13

Alignment explanation


    Indices: 228--252  Score: 50
    Period size: 13  Copynumber: 1.9  Consensus size: 13

        218 GCTGCCATGG

                         
        228 TTTTTTTTGTTTT
          1 TTTTTTTTGTTTT

                        
        241 TTTTTTTTGTTT
          1 TTTTTTTTGTTT

        253 AATTTTTAGT


Statistics
Matches: 12,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   12  1.00

ACGTcount: A:0.00, C:0.00, G:0.08, T:0.92


Consensus pattern (13 bp):   
TTTTTTTTGTTTT
Done.