Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g00373.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 669

Length: 1115
ACGTcount: A:0.30, C:0.21, G:0.19, T:0.30


Found at i:46 original size:5 final size:6

Alignment explanation


    Indices: 29--53  Score: 50
    Period size: 6  Copynumber: 4.2  Consensus size: 6

         19 TGTGAGACTC

                                         
         29 ACAAAA ACAAAA ACAAAA ACAAAA A
          1 ACAAAA ACAAAA ACAAAA ACAAAA A

         54 ATCTCTTTTT


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   19  1.00

ACGTcount: A:0.84, C:0.16, G:0.00, T:0.00


Consensus pattern (6 bp):   
ACAAAA

Done.