Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g00733.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 815

Length: 1359
ACGTcount: A:0.30, C:0.19, G:0.18, T:0.33


Found at i:43 original size:3 final size:3

Alignment explanation


    Indices: 35--63  Score: 58
    Period size: 3  Copynumber: 9.7  Consensus size: 3

         25 AGAGAAAGAA

                                                  
         35 TCT TCT TCT TCT TCT TCT TCT TCT TCT TC
          1 TCT TCT TCT TCT TCT TCT TCT TCT TCT TC

         64 ACTTTACATC


Statistics
Matches: 26,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   26  1.00

ACGTcount: A:0.00, C:0.34, G:0.00, T:0.66


Consensus pattern (3 bp):   
TCT

Done.