Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g00782.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1727
ACGTcount: A:0.30, C:0.21, G:0.21, T:0.28


Found at i:27 original size:6 final size:6

Alignment explanation


    Indices: 16--41  Score: 52
    Period size: 6  Copynumber: 4.3  Consensus size: 6

          6 AAGGAGCTTA

                                          
         16 AACCCT AACCCT AACCCT AACCCT AA
          1 AACCCT AACCCT AACCCT AACCCT AA

         42 GAATTATATC


Statistics
Matches: 20,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   20  1.00

ACGTcount: A:0.38, C:0.46, G:0.00, T:0.15


Consensus pattern (6 bp):   
AACCCT

Done.