Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g00945.P1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 643

Length: 1072
ACGTcount: A:0.28, C:0.17, G:0.24, T:0.30


Found at i:991 original size:6 final size:6

Alignment explanation


    Indices: 982--1014  Score: 66
    Period size: 6  Copynumber: 5.5  Consensus size: 6

        972 ATTGAAAATC

                                                  
        982 ATGTTT ATGTTT ATGTTT ATGTTT ATGTTT ATG
          1 ATGTTT ATGTTT ATGTTT ATGTTT ATGTTT ATG

       1015 AAATGTATGG


Statistics
Matches: 27,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   27  1.00

ACGTcount: A:0.18, C:0.00, G:0.18, T:0.64


Consensus pattern (6 bp):   
ATGTTT

Done.