Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g01460.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 854

Length: 1424
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.30


Found at i:981 original size:15 final size:15

Alignment explanation


    Indices: 961--998  Score: 76
    Period size: 15  Copynumber: 2.5  Consensus size: 15

        951 AACCACTACT

                           
        961 TCCACCTGGGCAGTA
          1 TCCACCTGGGCAGTA

                           
        976 TCCACCTGGGCAGTA
          1 TCCACCTGGGCAGTA

                    
        991 TCCACCTG
          1 TCCACCTG

        999 CACAACAGCA


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  15   23  1.00

ACGTcount: A:0.18, C:0.37, G:0.24, T:0.21


Consensus pattern (15 bp):   
TCCACCTGGGCAGTA
Done.