Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g01571.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 418

Length: 697
ACGTcount: A:0.30, C:0.17, G:0.20, T:0.32


Found at i:208 original size:14 final size:14

Alignment explanation


    Indices: 189--217  Score: 58
    Period size: 14  Copynumber: 2.1  Consensus size: 14

        179 TCAGCTGCGA

                          
        189 TCCACCACTATTGG
          1 TCCACCACTATTGG

                          
        203 TCCACCACTATTGG
          1 TCCACCACTATTGG

             
        217 T
          1 T

        218 GTAGCCCCGT


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   15  1.00

ACGTcount: A:0.21, C:0.34, G:0.14, T:0.31


Consensus pattern (14 bp):   
TCCACCACTATTGG
Done.