Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g01597.F5

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 877

Length: 1463
ACGTcount: A:0.30, C:0.18, G:0.24, T:0.28


Found at i:1368 original size:14 final size:14

Alignment explanation


    Indices: 1346--1375  Score: 51
    Period size: 14  Copynumber: 2.1  Consensus size: 14

       1336 GTCCAGTTAC

                          
       1346 CATTCAGTGCATAT
          1 CATTCAGTGCATAT

                *         
       1360 CATTTAGTGCATAT
          1 CATTCAGTGCATAT

              
       1374 CA
          1 CA

       1376 GTTTCAGCCA


Statistics
Matches: 15,  Mismatches: 1, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
  14   15  1.00

ACGTcount: A:0.30, C:0.20, G:0.13, T:0.37


Consensus pattern (14 bp):   
CATTCAGTGCATAT
Done.