Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g01636.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 611

Length: 1019
ACGTcount: A:0.27, C:0.18, G:0.22, T:0.33


Found at i:921 original size:13 final size:13

Alignment explanation


    Indices: 903--927  Score: 50
    Period size: 13  Copynumber: 1.9  Consensus size: 13

        893 ATCCACTTCT

                         
        903 GGTCTGTCAACTA
          1 GGTCTGTCAACTA

                        
        916 GGTCTGTCAACT
          1 GGTCTGTCAACT

        928 TCAAGTTTGT


Statistics
Matches: 12,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   12  1.00

ACGTcount: A:0.20, C:0.24, G:0.24, T:0.32


Consensus pattern (13 bp):   
GGTCTGTCAACTA
Done.