Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g01749.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2491
ACGTcount: A:0.26, C:0.23, G:0.20, T:0.31


Found at i:30 original size:5 final size:5

Alignment explanation


    Indices: 20--44  Score: 50
    Period size: 5  Copynumber: 5.0  Consensus size: 5

         10 ATAGCTACTC

                                         
         20 TCTCT TCTCT TCTCT TCTCT TCTCT
          1 TCTCT TCTCT TCTCT TCTCT TCTCT

         45 ATTTGATTCT


Statistics
Matches: 20,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   5   20  1.00

ACGTcount: A:0.00, C:0.40, G:0.00, T:0.60


Consensus pattern (5 bp):   
TCTCT

Done.