Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g01849.C1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2022
ACGTcount: A:0.31, C:0.16, G:0.21, T:0.32


Found at i:1831 original size:18 final size:18

Alignment explanation


    Indices: 1808--1844  Score: 74
    Period size: 18  Copynumber: 2.1  Consensus size: 18

       1798 CTCTGCTCTC

                              
       1808 GATTGTTTTCCAGTTATA
          1 GATTGTTTTCCAGTTATA

                              
       1826 GATTGTTTTCCAGTTATA
          1 GATTGTTTTCCAGTTATA

             
       1844 G
          1 G

       1845 TTTTGCGATG


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  18   19  1.00

ACGTcount: A:0.22, C:0.11, G:0.19, T:0.49


Consensus pattern (18 bp):   
GATTGTTTTCCAGTTATA
Done.