Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g01849.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 594

Length: 991
ACGTcount: A:0.33, C:0.17, G:0.24, T:0.27


Found at i:800 original size:18 final size:18

Alignment explanation


    Indices: 777--813  Score: 74
    Period size: 18  Copynumber: 2.1  Consensus size: 18

        767 CTCTGCTCTC

                              
        777 GATTGTTTTCCAGTTATA
          1 GATTGTTTTCCAGTTATA

                              
        795 GATTGTTTTCCAGTTATA
          1 GATTGTTTTCCAGTTATA

             
        813 G
          1 G

        814 TTTTGCGATG


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  18   19  1.00

ACGTcount: A:0.22, C:0.11, G:0.19, T:0.49


Consensus pattern (18 bp):   
GATTGTTTTCCAGTTATA
Done.