Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g01996.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 444

Length: 740
ACGTcount: A:0.21, C:0.26, G:0.20, T:0.33


Found at i:34 original size:3 final size:3

Alignment explanation


    Indices: 26--74  Score: 98
    Period size: 3  Copynumber: 16.3  Consensus size: 3

         16 ACGCTATCTC

                                                                           
         26 CTT CTT CTT CTT CTT CTT CTT CTT CTT CTT CTT CTT CTT CTT CTT CTT
          1 CTT CTT CTT CTT CTT CTT CTT CTT CTT CTT CTT CTT CTT CTT CTT CTT

             
         74 C
          1 C

         75 ACTATCTCTT


Statistics
Matches: 46,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   46  1.00

ACGTcount: A:0.00, C:0.35, G:0.00, T:0.65


Consensus pattern (3 bp):   
CTT

Done.