Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g02007.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 948

Length: 1580
ACGTcount: A:0.28, C:0.24, G:0.20, T:0.29


Found at i:1059 original size:6 final size:6

Alignment explanation


    Indices: 1048--1072  Score: 50
    Period size: 6  Copynumber: 4.2  Consensus size: 6

       1038 CACCCAAGCC

                                         
       1048 ATCCAA ATCCAA ATCCAA ATCCAA A
          1 ATCCAA ATCCAA ATCCAA ATCCAA A

       1073 CACAAGATAG


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   19  1.00

ACGTcount: A:0.52, C:0.32, G:0.00, T:0.16


Consensus pattern (6 bp):   
ATCCAA

Done.