Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g02023.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 794

Length: 1324
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30


Found at i:1126 original size:5 final size:5

Alignment explanation


    Indices: 1116--1145  Score: 51
    Period size: 5  Copynumber: 6.0  Consensus size: 5

       1106 TAGGTTCCCC

                                       *       
       1116 ATTTT ATTTT ATTTT ATTTT ATTGT ATTTT
          1 ATTTT ATTTT ATTTT ATTTT ATTTT ATTTT

       1146 TTCTTTGATA


Statistics
Matches: 23,  Mismatches: 2, Indels: 0
        0.92            0.08        0.00

Matches are distributed among these distances:
   5   23  1.00

ACGTcount: A:0.20, C:0.00, G:0.03, T:0.77


Consensus pattern (5 bp):   
ATTTT

Done.