Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g02125.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3951
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.29


Found at i:678 original size:5 final size:5

Alignment explanation


    Indices: 668--695  Score: 56
    Period size: 5  Copynumber: 5.6  Consensus size: 5

        658 TATTCGTTTT

                                             
        668 TTCCC TTCCC TTCCC TTCCC TTCCC TTC
          1 TTCCC TTCCC TTCCC TTCCC TTCCC TTC

        696 AATTCGACGT


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   5   23  1.00

ACGTcount: A:0.00, C:0.57, G:0.00, T:0.43


Consensus pattern (5 bp):   
TTCCC

Done.