Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g02185.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2153
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.31


Found at i:2087 original size:5 final size:5

Alignment explanation


    Indices: 2077--2118  Score: 84
    Period size: 5  Copynumber: 8.4  Consensus size: 5

       2067 GCCTGTAAAG

                                                              
       2077 TGGTA TGGTA TGGTA TGGTA TGGTA TGGTA TGGTA TGGTA TG
          1 TGGTA TGGTA TGGTA TGGTA TGGTA TGGTA TGGTA TGGTA TG

       2119 TAAAATGCAA


Statistics
Matches: 37,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   5   37  1.00

ACGTcount: A:0.19, C:0.00, G:0.40, T:0.40


Consensus pattern (5 bp):   
TGGTA

Done.