Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g02210.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 916

Length: 1528
ACGTcount: A:0.27, C:0.21, G:0.21, T:0.32


Found at i:1494 original size:7 final size:7

Alignment explanation


    Indices: 1482--1510  Score: 58
    Period size: 7  Copynumber: 4.1  Consensus size: 7

       1472 AATTTAGTTG

                   
       1482 CTTTAAT
          1 CTTTAAT

                   
       1489 CTTTAAT
          1 CTTTAAT

                   
       1496 CTTTAAT
          1 CTTTAAT

                   
       1503 CTTTAAT
          1 CTTTAAT

             
       1510 C
          1 C

       1511 AATCCAGTTT


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   7   22  1.00

ACGTcount: A:0.28, C:0.17, G:0.00, T:0.55


Consensus pattern (7 bp):   
CTTTAAT

Done.