Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g02231.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1853
ACGTcount: A:0.25, C:0.21, G:0.23, T:0.31


Found at i:1771 original size:14 final size:14

Alignment explanation


    Indices: 1752--1778  Score: 54
    Period size: 14  Copynumber: 1.9  Consensus size: 14

       1742 TTCAGTTCAC

                          
       1752 TTCTTTTTTTCTTT
          1 TTCTTTTTTTCTTT

                         
       1766 TTCTTTTTTTCTT
          1 TTCTTTTTTTCTT

       1779 CCGACTTAAA


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   13  1.00

ACGTcount: A:0.00, C:0.15, G:0.00, T:0.85


Consensus pattern (14 bp):   
TTCTTTTTTTCTTT
Done.