Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga01g01754.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1914
ACGTcount: A:0.28, C:0.19, G:0.24, T:0.29


Found at i:1832 original size:5 final size:5

Alignment explanation


    Indices: 1822--1846  Score: 50
    Period size: 5  Copynumber: 5.0  Consensus size: 5

       1812 GGTTGAATAA

                                         
       1822 GTTTG GTTTG GTTTG GTTTG GTTTG
          1 GTTTG GTTTG GTTTG GTTTG GTTTG

       1847 TGTGCTTAAT


Statistics
Matches: 20,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   5   20  1.00

ACGTcount: A:0.00, C:0.00, G:0.40, T:0.60


Consensus pattern (5 bp):   
GTTTG

Done.