Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g02390.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1806
ACGTcount: A:0.30, C:0.19, G:0.22, T:0.29


Found at i:1638 original size:2 final size:2

Alignment explanation


    Indices: 1631--1660  Score: 51
    Period size: 2  Copynumber: 15.0  Consensus size: 2

       1621 ATAGAAACAT

                         *                              
       1631 TA TA TA TA TC TA TA TA TA TA TA TA TA TA TA
          1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA

       1661 GCTTTGCGGT


Statistics
Matches: 26,  Mismatches: 2, Indels: 0
        0.93            0.07        0.00

Matches are distributed among these distances:
   2   26  1.00

ACGTcount: A:0.47, C:0.03, G:0.00, T:0.50


Consensus pattern (2 bp):   
TA

Done.