Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga08g00243.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1902
ACGTcount: A:0.28, C:0.18, G:0.21, T:0.33


Found at i:193 original size:14 final size:14

Alignment explanation


    Indices: 174--201  Score: 56
    Period size: 14  Copynumber: 2.0  Consensus size: 14

        164 TTCATTGCCA

                          
        174 TTTTTGTTTTTTTT
          1 TTTTTGTTTTTTTT

                          
        188 TTTTTGTTTTTTTT
          1 TTTTTGTTTTTTTT

        202 GGATCTTTCA


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   14  1.00

ACGTcount: A:0.00, C:0.00, G:0.07, T:0.93


Consensus pattern (14 bp):   
TTTTTGTTTTTTTT
Done.