Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga01g01807.C1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 5150
ACGTcount: A:0.32, C:0.19, G:0.22, T:0.28


Found at i:4652 original size:6 final size:6

Alignment explanation


    Indices: 4614--4651  Score: 58
    Period size: 6  Copynumber: 6.3  Consensus size: 6

       4604 GCTCAAGCTT

                 *                               *      
       4614 GAGCCT GAGCCC GAGCCC GAGCCC GAGCCC GAACCC GA
          1 GAGCCC GAGCCC GAGCCC GAGCCC GAGCCC GAGCCC GA

       4652 AAGATCTTAT


Statistics
Matches: 30,  Mismatches: 2, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
   6   30  1.00

ACGTcount: A:0.21, C:0.45, G:0.32, T:0.03


Consensus pattern (6 bp):   
GAGCCC
Done.