Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga08g00694.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 549

Length: 915
ACGTcount: A:0.27, C:0.19, G:0.16, T:0.38


Found at i:428 original size:26 final size:26

Alignment explanation


    Indices: 392--445  Score: 108
    Period size: 26  Copynumber: 2.1  Consensus size: 26

        382 TTATCCCAAA

                                      
        392 TAGACACGCTATTTCCTTCATTGTAT
          1 TAGACACGCTATTTCCTTCATTGTAT

                                      
        418 TAGACACGCTATTTCCTTCATTGTAT
          1 TAGACACGCTATTTCCTTCATTGTAT

              
        444 TA
          1 TA

        446 CACGTGTATT


Statistics
Matches: 28,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  26   28  1.00

ACGTcount: A:0.24, C:0.22, G:0.11, T:0.43


Consensus pattern (26 bp):   
TAGACACGCTATTTCCTTCATTGTAT
Done.