Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Ga08g00722.M1
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 9398
ACGTcount: A:0.34, C:0.16, G:0.24, T:0.26
Found at i:4821 original size:888 final size:887
Alignment explanation
Indices: 2843--6291 Score: 4269
Period size: 888 Copynumber: 3.9 Consensus size: 887
2833 GGAGAATTCC
* * * * * ** * ** *
2843 CTTTTTGATGCACATGCTGAACTTGGAGGATTGAGGGTAAAGGTAATGAGCTTAGAAAACTCATG
1 CTTTGTGATGCAAATGCTGAACTTGAAGGATTGAAGGAAAAATTAAAGAGCTTAGAAATTTCATA
* * * * * *
2908 CCTGCTGCTTGGTGATGAGAAGTCTGCCCTGATAAGACAAAGAGAAGGCTTGATTTCTGAGTTGA
66 CCAGCTGCTTGGTGATGAGAAGTCTGGCCTGCTAACACAGAGAGAAGGTTTGATTTCTGAGTTGA
* * * * * **
2973 GTATCAGTCAGGAAAGGTTGGAAGATTCGGAAAAAAGATATCAGGGTTTAGAAGAAAAATACATG
131 ATATCAGTCAGAAAAGGCTGGAAGATTTGG-AAAAAGATATCAGGGATTAGAAGAAAAATATGTG
* *
3038 GGCCTGGAGAAAGAGAGAGAATTAACACTT-AGTGAAGTAGAAGAGCTACAAAAGTCACTAGATG
195 GGTCTGGAGAAAGAGAGAGAATCAACACTTCA-TGAAGTAGAAGAGCTACAAAAGTCACTAGATG
* * * ** * * *
3102 TGGAAAAGCAAGAATATGCCAGTTTCATGCAGTTGAATGAAACCCGAGTTACTGCTATGGAATCT
259 CGGAAAAGCAAGAACATGCTAGTTTTGTGAAGTTGAATGAAACCCGAGTCACTTCTATGGAATCT
* * *
3167 CAGAT-CAGTTTTCTACAAGGGGAAAGTCTGTGCAGAAAGAAAGAATATGAAGAGGAACTGGAC-
324 CAGATCCA-TTTTCTACAAGGAGAAAGTCTATGCAGGAAGAAAGAATATGAAGAGGAACTGGACA
*
3230 AGGTCCATGAATGCTCATGTAGAAACCTTCATCTTGCAGAAATGTGCACAAGATATGGAAGAGAA
388 AGG-CCATGAATGCTCATGTAGAAACCTTCATCTTGCAGAAATGTGCACAAGATCTGGAAGAGAA
* * * * **
3295 GAATTTATCCCTATTGTTTGAGTGTAGGAAACTCCTGGAAGCCTCCAATTTTTCTGAAAAACTTA
452 GAATTTATCCCTATTGCTTGAGTGTAGGAAACTCTTGGAAGCCTCCAAATTATCCAAAAAACTTA
** * * *
3360 TCTCTGAATTGGAGCTCAGAAATTCCAAAAAAGAGATGGAGATAAAATCCTTATTTGATCGAATT
517 TCTCTGAATTGGAGCTTGGAAATTCCAGAAAACAGATGGAGATAAAATCCTTATTTGATCAAATT
* *
3425 ACTATACTGAGGATGGGGCTTTATCAAATGCTGAAGG-CTCTTGAAATTGATG---TCCATGGTT
582 ACTATACTGAGGATGGGGCTTTATCAGATGTTG-AGGACTCTTGAAATTGATGCTATCCATGGTT
* * *
3486 ATGATGATA-AGATCAAACAAGACCAATTAGTCCTTGACTGTATATTTGG-AGGGATCCAAAAGA
646 ATGATGATACA-ATCAAACAAGACCAATCAGTTCTTGACTGTATATTTGGCA-GGCTCCAAAAGA
* *
3549 TG-AAGAACTCACATT-TAAAGTCTCTGGATGATAATCAGCAATTCATAATTGAGAATTCAGTTC
709 TGCAA-AATTCAC-TTCTAAAGTCTCTGGATGAAAATCAGCAATTCATAATTGAGAATTCAGTTC
* * * * *
3612 TTATTGGATTGCTTGGGCAACTGAAACTTGAGGCAGAAAATCTTGCTACAGAGAAGAACTCACTG
772 TTATTGGATTGCTTGGGCAACTGAAACTAGAGGCTGAAAATCTTGCAACAGAAAATAACTCACTG
* * * * * * *
3677 CACCAGGAGTTGAAGGTTCAGTTCGAG-AAGTTCTCAGAATTGGAGACTTC-C
837 CATCAGGAGTTGAAGGTTCAGTCCGAGCAA-TTTTCAGAAGTGAAGA-ATCAT
* * * * * *
3728 CTTTTTAATACAAATGCTGAACTTGAA--ATATCAAGAGCAAAACTT-AAGAGCTTAGAAAGTTC
1 CTTTGTGATGCAAATGCTGAACTTGAAGGAT-TGAAG-G-AAAAATTAAAGAGCTTAGAAATTTC
* * * *
3790 ATGCCTGCTGCTTGGTGAAGAGAAGTCTGGCCTGCTAACACAGAGAGAAGGTTTGATATCTGAGT
63 ATACCAGCTGCTTGGTGATGAGAAGTCTGGCCTGCTAACACAGAGAGAAGGTTTGATTTCTGAGT
* * *
3855 TGAATGTCAGTCAGAAAAGGCTGGAAGATTTGGAGGAAAGATATCAGGGATTAGAGGAAAAATAT
128 TGAATATCAGTCAGAAAAGGCTGGAAGATTTGGA-AAAAGATATCAGGGATTAGAAGAAAAATAT
* **
3920 GTGGGTCTGGAGAAAGTGAGAGAATCAACACTTTGTGAAGTAGAAGAGCTACAAAAGTCACTAGA
192 GTGGGTCTGGAGAAAGAGAGAGAATCAACACTTCATGAAGTAGAAGAGCTACAAAAGTCACTAGA
* * **
3985 TGCGGAAAAGCAAGAACATGCTAGATTTGTGAAGTCGAATGAAGTCCGAGTCACTTCTATGGAAT
257 TGCGGAAAAGCAAGAACATGCTAGTTTTGTGAAGTTGAATGAAACCCGAGTCACTTCTATGGAAT
*
4050 CTCAAATCCATTTTCTACAAGGAGAAAGTCTATGCAGGAAGAAAGAATATG-AGAAGGAACTGGA
322 CTCAGATCCATTTTCTACAAGGAGAAAGTCTATGCAGGAAGAAAGAATATGAAG-AGGAACTGGA
* * * *
4114 CAAGGCCATGAATGCTCATGTAGAAACCTTCATTTTGCAGAGATGTGCACAAGATCTCGAAGTGA
386 CAAGGCCATGAATGCTCATGTAGAAACCTTCATCTTGCAGAAATGTGCACAAGATCTGGAAGAGA
* * *
4179 AGAATTTATCCCTATTGCGTGAGTGTAGCAAACTCTTGGAAGCCTCCAGATTATCCAAAAAACTT
451 AGAATTTATCCCTATTGCTTGAGTGTAGGAAACTCTTGGAAGCCTCCAAATTATCCAAAAAACTT
* * * *
4244 ATCTCTGAGTTGGAGCTTGGAAATTCCCA-AAAACAGGTGGAGATAGAATCCTTATCTGATCAAA
516 ATCTCTGAATTGGAGCTTGGAAATT-CCAGAAAACAGATGGAGATAAAATCCTTATTTGATCAAA
* * * * *** *
4308 TCACTTTACTGAGGATGGGGCTCTATCAGATGTTGAGGATTCTTGGTTTTGATGGTATCCATGGT
580 TTACTATACTGAGGATGGGGCTTTATCAGATGTTGAGGACTCTTGAAATTGATGCTATCCATGGT
* * **
4373 TATGATGATACAATCAAACAAGATCAATCAGTACTTGACTGTATATCAGGCAGGCTCCAAAAGAT
645 TATGATGATACAATCAAACAAGACCAATCAGTTCTTGACTGTATATTTGGCAGGCTCCAAAAGAT
* *
4438 GCAAAATTCACTTCTAAAGTCTCTGGACGAAAATCAGCAGTTCATAATTGAGAATTCAGTTCTTA
710 GCAAAATTCACTTCTAAAGTCTCTGGATGAAAATCAGCAATTCATAATTGAGAATTCAGTTCTTA
* *
4503 TTGGATTGCTTGGGCAACTGGAACTAGAGGCTGAAAATCTTGCAACAGAAAATAATTCACTGCAT
775 TTGGATTGCTTGGGCAACTGAAACTAGAGGCTGAAAATCTTGCAACAGAAAATAACTCACTGCAT
*
4568 CAGGAGCTGAAGGTTCAGTCCGAGCAATTTTCAGAAGTGAAGAATCAT
840 CAGGAGTTGAAGGTTCAGTCCGAGCAATTTTCAGAAGTGAAGAATCAT
* *
4616 CTTTGTGATGCAAATGCTGAAGTTGAAGGTTTGAAGGAAAAATTAAAGAGCTTAGAAATTTCATA
1 CTTTGTGATGCAAATGCTGAACTTGAAGGATTGAAGGAAAAATTAAAGAGCTTAGAAATTTCATA
* * *
4681 CCAGCTGCTTGGTGATGAGAAGTTTGGTCTGCTAACACAGAGAGAAGGTTTGACTTCTGAGTTGA
66 CCAGCTGCTTGGTGATGAGAAGTCTGGCCTGCTAACACAGAGAGAAGGTTTGATTTCTGAGTTGA
* * * *
4746 ATGTCAGCCAGAAAAGGCTGAAAGATTTGGAAAAACGATATCAGGAATTAGAAGAAAAATATGTG
131 ATATCAGTCAGAAAAGGCTGGAAGATTTGGAAAAA-GATATCAGGGATTAGAAGAAAAATATGTG
* * * * * * *
4811 GGTTTGGAGAAAGAGAGAGAATCAGCACTTCATGGAGTACAAAAGCTACAAAAGTCATTGGATGC
195 GGTCTGGAGAAAGAGAGAGAATCAACACTTCATGAAGTAGAAGAGCTACAAAAGTCACTAGATGC
* * * * *
4876 TGAAATGGAAGAACATGCTAGTTTTGTGAAGTTGAATGAAACCCGAGTTACTTCTATGGTATCTC
260 GGAAAAGCAAGAACATGCTAGTTTTGTGAAGTTGAATGAAACCCGAGTCACTTCTATGGAATCTC
*
4941 AGATCCA--TT-T------------TCTA--C-----------A-A-G--G-GGAACTTGACAAG
325 AGATCCATTTTCTACAAGGAGAAAGTCTATGCAGGAAGAAAGAATATGAAGAGGAACTGGACAAG
* * * * * *
4973 GCCATGGATGCTCATGTAGAAACCTTCGTTTTGCAGAGATGTGCACGAGATCTGGAAGAGAATAA
390 GCCATGAATGCTCATGTAGAAACCTTCATCTTGCAGAAATGTGCACAAGATCTGGAAGAGAAGAA
* * ** * ** *
5038 TTTATCCCTATTGCTTGAGTGTAGGAAGCTCTTGGAAGCGTTGAAATTGTCTGAAATACTTATCT
455 TTTATCCCTATTGCTTGAGTGTAGGAAACTCTTGGAAGCCTCCAAATTATCCAAAAAACTTATCT
* * *
5103 CTGAATTGGAGCTAGGAAATTCCAGAAAACAGATGGAGATAAAATCCTTATTTGATCTAATTACC
520 CTGAATTGGAGCTTGGAAATTCCAGAAAACAGATGGAGATAAAATCCTTATTTGATCAAATTACT
* ** *
5168 AT-CTTGAGGATGGGGCTTAATCAGATGTTGAGGACTCTTGGGATTGATGCTATCCATAGTTATG
585 ATAC-TGAGGATGGGGCTTTATCAGATGTTGAGGACTCTTGAAATTGATGCTATCCATGGTTATG
* ** * *
5232 ATGACATGATCAAACAAGACCAATCTGTTCTTGACTGTATATTTGGCAGACTCCAAAAGATGCAA
649 ATGATACAATCAAACAAGACCAATCAGTTCTTGACTGTATATTTGGCAGGCTCCAAAAGATGCAA
* * *
5297 AATTCACTTTTGAAGTCTCTGGATGAAAATCAGCAAATCATAATTGAGAATTCAGTTCTTATTGG
714 AATTCACTTCTAAAGTCTCTGGATGAAAATCAGCAATTCATAATTGAGAATTCAGTTCTTATTGG
*
5362 ATTGCTTGGGCAACTGAAGCTAGAGGCTGAAAATCTTGCAACAGAAAATAACTCACTGCATCAGG
779 ATTGCTTGGGCAACTGAAACTAGAGGCTGAAAATCTTGCAACAGAAAATAACTCACTGCATCAGG
* * * *
5427 AATTGAAGGTTCAGTCTGAGCAGTTTTCAGAAGTGAAGAATTAT
844 AGTTGAAGGTTCAGTCCGAGCAATTTTCAGAAGTGAAGAATCAT
* *
5471 CTTTGTGATGCAAATGCTGAAGTTGAAGGATTG-AGTACAAAATTAAAGAGCTTAGAAATTTCAT
1 CTTTGTGATGCAAATGCTGAACTTGAAGGATTGAAGGA-AAAATTAAAGAGCTTAGAAATTTCAT
**
5535 ACCAGCTGCTTGGTGATGAGAAGTCTGGTTTGCTAACACAGAGAGAAGGTTTGATTTCTGAGTTG
65 ACCAGCTGCTTGGTGATGAGAAGTCTGGCCTGCTAACACAGAGAGAAGGTTTGATTTCTGAGTTG
* *
5600 AATATCAGTCAGAAAAGGATGGAAGATTTGGAAAATAGATATCAGGGATTAGAAGAAAAGTATG-
130 AATATCAGTCAGAAAAGGCTGGAAGATTTGGAAAA-AGATATCAGGGATTAGAAGAAAAATATGT
* ** * * *
5664 AGGTCCTGGAGAAAGAGAGAGAATCAATGCTTCATGAAGTAGAAGAACTACAAAGGTCATTAGAT
194 GGGT-CTGGAGAAAGAGAGAGAATCAACACTTCATGAAGTAGAAGAGCTACAAAAGTCACTAGAT
* * *
5729 GCTGAAAAGC-AGCAACATGCTAGTTTTGTGAAGTTGAATGAAACCAG-GGCTACTTCTATGGAA
258 GCGGAAAAGCAAG-AACATGCTAGTTTTGTGAAGTTGAATGAAACCCGAGTC-ACTTCTATGGAA
* ** * * * * *
5792 TCTCAGATCCATTTCCTACAAGGAGAAAGTCTGCGCATGAAAAAAGAATACGAAGAGGAGCTAGA
321 TCTCAGATCCATTTTCTACAAGGAGAAAGTCTATGCAGGAAGAAAGAATATGAAGAGGAACTGGA
* *
5857 TAAGGCCATGAATGCTCATGTAGAAACCTTCATCTTGCAAAAATGTGCACAAGATCTGGAAGAGA
386 CAAGGCCATGAATGCTCATGTAGAAACCTTCATCTTGCAGAAATGTGCACAAGATCTGGAAGAGA
* ** * *
5922 AGAATTTATCCTTGGTGCTTGAGTGTAGGAACCTCTTGGAAGCCTCTAAATTAT-CAAAAGAACT
451 AGAATTTATCCCTATTGCTTGAGTGTAGGAAACTCTTGGAAGCCTCCAAATTATCCAAAA-AACT
* * *** *
5986 TATCTCAGAATTGGAGCTTGGAAATTCCATAAAACAGACACAGATAAAAGCCTTATTTGATCAAA
515 TATCTCTGAATTGGAGCTTGGAAATTCCAGAAAACAGATGGAGATAAAATCCTTATTTGATCAAA
* * * * **
6051 TTTCTGTACTGAGGATGGGGATTTATCAGATGTTGAGGACTCTTGAAGTTGATGCTATCTGTGGT
580 TTACTATACTGAGGATGGGGCTTTATCAGATGTTGAGGACTCTTGAAATTGATGCTATCCATGGT
* *
6116 TATGATGATACGATCAAACATGACCAATCAGTTCTTGACTGTATATTTGGCAGGCTCCAAAAGAT
645 TATGATGATACAATCAAACAAGACCAATCAGTTCTTGACTGTATATTTGGCAGGCTCCAAAAGAT
* *
6181 GCAAAATTCACTTCTAATGTCTCTGGATGAAAATCAACAATTCATAATTGAGAATTCAGTTCTTA
710 GCAAAATTCACTTCTAAAGTCTCTGGATGAAAATCAGCAATTCATAATTGAGAATTCAGTTCTTA
* *
6246 TTGTAATT-CTTAGGCAACTGAAACTAGAGGCTGAAAATCTTGCAAC
775 TTG-GATTGCTTGGGCAACTGAAACTAGAGGCTGAAAATCTTGCAAC
6292 TGAGAATAGT
Statistics
Matches: 2214, Mismatches: 284, Indels: 129
0.84 0.11 0.05
Matches are distributed among these distances:
854 13 0.01
855 738 0.33
856 1 0.00
857 2 0.00
858 2 0.00
859 1 0.00
860 1 0.00
870 3 0.00
871 1 0.00
872 1 0.00
873 4 0.00
883 3 0.00
884 10 0.00
885 523 0.24
886 14 0.01
887 17 0.01
888 865 0.39
889 14 0.01
890 1 0.00
ACGTcount: A:0.35, C:0.15, G:0.23, T:0.27
Consensus pattern (887 bp):
CTTTGTGATGCAAATGCTGAACTTGAAGGATTGAAGGAAAAATTAAAGAGCTTAGAAATTTCATA
CCAGCTGCTTGGTGATGAGAAGTCTGGCCTGCTAACACAGAGAGAAGGTTTGATTTCTGAGTTGA
ATATCAGTCAGAAAAGGCTGGAAGATTTGGAAAAAGATATCAGGGATTAGAAGAAAAATATGTGG
GTCTGGAGAAAGAGAGAGAATCAACACTTCATGAAGTAGAAGAGCTACAAAAGTCACTAGATGCG
GAAAAGCAAGAACATGCTAGTTTTGTGAAGTTGAATGAAACCCGAGTCACTTCTATGGAATCTCA
GATCCATTTTCTACAAGGAGAAAGTCTATGCAGGAAGAAAGAATATGAAGAGGAACTGGACAAGG
CCATGAATGCTCATGTAGAAACCTTCATCTTGCAGAAATGTGCACAAGATCTGGAAGAGAAGAAT
TTATCCCTATTGCTTGAGTGTAGGAAACTCTTGGAAGCCTCCAAATTATCCAAAAAACTTATCTC
TGAATTGGAGCTTGGAAATTCCAGAAAACAGATGGAGATAAAATCCTTATTTGATCAAATTACTA
TACTGAGGATGGGGCTTTATCAGATGTTGAGGACTCTTGAAATTGATGCTATCCATGGTTATGAT
GATACAATCAAACAAGACCAATCAGTTCTTGACTGTATATTTGGCAGGCTCCAAAAGATGCAAAA
TTCACTTCTAAAGTCTCTGGATGAAAATCAGCAATTCATAATTGAGAATTCAGTTCTTATTGGAT
TGCTTGGGCAACTGAAACTAGAGGCTGAAAATCTTGCAACAGAAAATAACTCACTGCATCAGGAG
TTGAAGGTTCAGTCCGAGCAATTTTCAGAAGTGAAGAATCAT
Found at i:7381 original size:483 final size:483
Alignment explanation
Indices: 6474--7443 Score: 1604
Period size: 483 Copynumber: 2.0 Consensus size: 483
6464 CTATCAGAGT
6474 TGCAAAGGGCATATCAAAGTTCAATTGAAGAGAACCACAAGGTGCTAGACGAGAAAAGGACTTTG
1 TGCAAAGGGCATATCAAAGTTCAATTGAAGAGAACCACAAGGTGCTAGACGAGAAAAGGACTTTG
* * *
6539 ATGAAGGAAGTTTCAGATTTGGGCAAGGAGAAACACAATCTAGAAGAGGAAAATTGTGCTGTCTT
66 ATGAAGGAAGTTTCAGACTTGGGCAAGGAGAAACACAATCTAGAAGAGGAAAACTGCGCTGTCTT
6604 TGCCGAAGCAATATCTCAAAGTAACATTGCTCTTATTCTCAAGAACATTATTACTGATAATTTTG
131 TGCCGAAGCAATATCTCAAAGTAACATTGCTCTTATTCTCAAGAACATTATTACTGATAATTTTG
*
6669 TGGAAATAAAGCATCTCAGTGCCAATCTGGATAAACTCAAATGTTTCAATGACGATCTTGAGGGA
196 TGGAAATAAAGCATCTCAGTGCCAATCTGGATAAACTCAAATGTTCCAATGACGATCTTGAGGGA
*
6734 AAACTGAGGATAATGGAGATCAAGCTTGAAGAAACACAAATGGTAAACTTACATCTCAAGGATAC
261 AAACTGAGGATAATGGAGATCAAGCTTGAAGAAACACAAATGGTAAACTCACATCTCAAGGATAC
* * *
6799 AGTGCAGAACTTGGAGAATGGGCTAGTTTCAGTTAGATCTGTTTGCAATCAGTTAAATGATGAAG
326 AGTGCAGAACTTGGAGAATGAGCTAGTTTCAGTTAAATCTGTTTGCAATCAGTTAAATGACGAAG
* * * * *
6864 TTGTGAAGGGAAAGGATCTATTATGCCTGAAGGAGAAGGAGTTTTTGGAAGCAGAGAAGATGCTC
391 TCGTGAAGGGAAAGGATCTACTATGCCAGAAGGAGAAGGAGCTTCTGGAAGCAGAGAAGATGCTC
6929 AGTGCAACTCAAGAGGAGAGAAACCAAC
456 AGTGCAACTCAAGAGGAGAGAAACCAAC
* *
6957 TGCAAAGGGCATATCAAAGTTCAGTTGAAGAGAACCACAAGGTGCTAGATGAGAAAAGGACTTTG
1 TGCAAAGGGCATATCAAAGTTCAATTGAAGAGAACCACAAGGTGCTAGACGAGAAAAGGACTTTG
***
7022 ATGAAGTTTGTTTCAGACTTGGGCAAGGAGAAACACAATCTAGAAGAGGAAAACTGCGCTGTCTT
66 ATGAAGGAAGTTTCAGACTTGGGCAAGGAGAAACACAATCTAGAAGAGGAAAACTGCGCTGTCTT
* * * *
7087 TGCTGAAGCAGTATCTCAAAGTAACATTTCGT-TTATTCTCAAGGACATTATTACTGATAATTTT
131 TGCCGAAGCAATATCTCAAAGTAACATTGC-TCTTATTCTCAAGAACATTATTACTGATAATTTT
* *
7151 GTTGAAATAAAGCATCTCA-TGGCCAATCTGGATAAACTCAAATGTTCCAATGATGATCTTGAGG
195 GTGGAAATAAAGCATCTCAGT-GCCAATCTGGATAAACTCAAATGTTCCAATGACGATCTTGAGG
* * *
7215 GAAAACTGAGGATAATGGGGATCAAGTTTGAAGAAACGCAAATGGTAAACTCACATCTCAAGGAT
259 GAAAACTGAGGATAATGGAGATCAAGCTTGAAGAAACACAAATGGTAAACTCACATCTCAAGGAT
7280 A-AGGTGCAGAACTTGGAGAATGAGCTAGTTTCAGTTAAATCTGTTTGCAATCAGTTAAATGACG
324 ACA-GTGCAGAACTTGGAGAATGAGCTAGTTTCAGTTAAATCTGTTTGCAATCAGTTAAATGACG
* * * *
7344 AAGTCGTGAAGGGAAAGGATCTACTATGCCAGAAGGAGAATGAGCTTCTGGAAGCAGGGCAGCTG
388 AAGTCGTGAAGGGAAAGGATCTACTATGCCAGAAGGAGAAGGAGCTTCTGGAAGCAGAGAAGATG
*
7409 CTCAGTGCAACTCAAGAGGAGAGAACCCAAC
453 CTCAGTGCAACTCAAGAGGAGAGAAACCAAC
7440 TGCA
1 TGCA
7444 TGAAGTTGTG
Statistics
Matches: 452, Mismatches: 32, Indels: 6
0.92 0.07 0.01
Matches are distributed among these distances:
482 2 0.00
483 449 0.99
484 1 0.00
ACGTcount: A:0.36, C:0.15, G:0.24, T:0.25
Consensus pattern (483 bp):
TGCAAAGGGCATATCAAAGTTCAATTGAAGAGAACCACAAGGTGCTAGACGAGAAAAGGACTTTG
ATGAAGGAAGTTTCAGACTTGGGCAAGGAGAAACACAATCTAGAAGAGGAAAACTGCGCTGTCTT
TGCCGAAGCAATATCTCAAAGTAACATTGCTCTTATTCTCAAGAACATTATTACTGATAATTTTG
TGGAAATAAAGCATCTCAGTGCCAATCTGGATAAACTCAAATGTTCCAATGACGATCTTGAGGGA
AAACTGAGGATAATGGAGATCAAGCTTGAAGAAACACAAATGGTAAACTCACATCTCAAGGATAC
AGTGCAGAACTTGGAGAATGAGCTAGTTTCAGTTAAATCTGTTTGCAATCAGTTAAATGACGAAG
TCGTGAAGGGAAAGGATCTACTATGCCAGAAGGAGAAGGAGCTTCTGGAAGCAGAGAAGATGCTC
AGTGCAACTCAAGAGGAGAGAAACCAAC
Done.