Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga08g01150.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3254
ACGTcount: A:0.28, C:0.17, G:0.21, T:0.34


Found at i:1950 original size:2 final size:2

Alignment explanation


    Indices: 1938--1973  Score: 63
    Period size: 2  Copynumber: 18.0  Consensus size: 2

       1928 TTTATGTATA

                  *                                              
       1938 TG TG CG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG
          1 TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG TG

       1974 CTGCTGCATG


Statistics
Matches: 32,  Mismatches: 2, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
   2   32  1.00

ACGTcount: A:0.00, C:0.03, G:0.50, T:0.47


Consensus pattern (2 bp):   
TG

Done.