Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga01g01917.F10

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3554
ACGTcount: A:0.29, C:0.17, G:0.23, T:0.31


Found at i:19 original size:2 final size:2

Alignment explanation


    Indices: 13--39  Score: 54
    Period size: 2  Copynumber: 13.5  Consensus size: 2

          3 TTCCCCAAGG

                                                    
         13 GA GA GA GA GA GA GA GA GA GA GA GA GA G
          1 GA GA GA GA GA GA GA GA GA GA GA GA GA G

         40 TTCAAAATGC


Statistics
Matches: 25,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   2   25  1.00

ACGTcount: A:0.48, C:0.00, G:0.52, T:0.00


Consensus pattern (2 bp):   
GA

Done.