Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga08g02272.N6

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1834
ACGTcount: A:0.30, C:0.20, G:0.19, T:0.30


Found at i:1062 original size:3 final size:3

Alignment explanation


    Indices: 1056--1089  Score: 68
    Period size: 3  Copynumber: 11.3  Consensus size: 3

       1046 CTGCTACTGC

                                                         
       1056 TGG TGG TGG TGG TGG TGG TGG TGG TGG TGG TGG T
          1 TGG TGG TGG TGG TGG TGG TGG TGG TGG TGG TGG T

       1090 AAAAAGAATA


Statistics
Matches: 31,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   31  1.00

ACGTcount: A:0.00, C:0.00, G:0.65, T:0.35


Consensus pattern (3 bp):   
TGG

Done.