Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga01g00237.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 789

Length: 1316
ACGTcount: A:0.28, C:0.20, G:0.19, T:0.33


Found at i:1004 original size:3 final size:3

Alignment explanation


    Indices: 990--1030  Score: 73
    Period size: 3  Copynumber: 13.7  Consensus size: 3

        980 ACCACACAAT

                  *                                               
        990 TGA TGT TGA TGA TGA TGA TGA TGA TGA TGA TGA TGA TGA TG
          1 TGA TGA TGA TGA TGA TGA TGA TGA TGA TGA TGA TGA TGA TG

       1031 GTAGCAGCAG


Statistics
Matches: 36,  Mismatches: 2, Indels: 0
        0.95            0.05        0.00

Matches are distributed among these distances:
   3   36  1.00

ACGTcount: A:0.29, C:0.00, G:0.34, T:0.37


Consensus pattern (3 bp):   
TGA

Done.