Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga08g02592.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 562

Length: 937
ACGTcount: A:0.32, C:0.20, G:0.22, T:0.26


Found at i:227 original size:12 final size:12

Alignment explanation


    Indices: 212--243  Score: 55
    Period size: 12  Copynumber: 2.7  Consensus size: 12

        202 ATCACCACCC

                        
        212 CCACCACCGCCG
          1 CCACCACCGCCG

                 *      
        224 CCACCGCCGCCG
          1 CCACCACCGCCG

                    
        236 CCACCACC
          1 CCACCACC

        244 ACCCATTGTT


Statistics
Matches: 18,  Mismatches: 2, Indels: 0
        0.90            0.10        0.00

Matches are distributed among these distances:
  12   18  1.00

ACGTcount: A:0.16, C:0.69, G:0.16, T:0.00


Consensus pattern (12 bp):   
CCACCACCGCCG
Done.