Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga08g02619.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2052
ACGTcount: A:0.31, C:0.19, G:0.23, T:0.28


Found at i:1910 original size:12 final size:12

Alignment explanation


    Indices: 1893--1918  Score: 52
    Period size: 12  Copynumber: 2.2  Consensus size: 12

       1883 TACATATATG

                        
       1893 TACACACATACA
          1 TACACACATACA

                        
       1905 TACACACATACA
          1 TACACACATACA

              
       1917 TA
          1 TA

       1919 TAGCTAAATT


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   14  1.00

ACGTcount: A:0.50, C:0.31, G:0.00, T:0.19


Consensus pattern (12 bp):   
TACACACATACA
Done.