Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga08g02643.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 508

Length: 848
ACGTcount: A:0.30, C:0.16, G:0.24, T:0.30


Found at i:697 original size:4 final size:4

Alignment explanation


    Indices: 690--717  Score: 56
    Period size: 4  Copynumber: 7.0  Consensus size: 4

        680 GGTTTATATA

                                              
        690 TATG TATG TATG TATG TATG TATG TATG
          1 TATG TATG TATG TATG TATG TATG TATG

        718 GTGGAACCCC


Statistics
Matches: 24,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   4   24  1.00

ACGTcount: A:0.25, C:0.00, G:0.25, T:0.50


Consensus pattern (4 bp):   
TATG

Done.