Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga09g00080.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 430

Length: 717
ACGTcount: A:0.35, C:0.13, G:0.20, T:0.32


Found at i:498 original size:13 final size:13

Alignment explanation


    Indices: 480--504  Score: 50
    Period size: 13  Copynumber: 1.9  Consensus size: 13

        470 AACAAAATAT

                         
        480 AACCATCATATAC
          1 AACCATCATATAC

                        
        493 AACCATCATATA
          1 AACCATCATATA

        505 AAGGATTAAC


Statistics
Matches: 12,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   12  1.00

ACGTcount: A:0.48, C:0.28, G:0.00, T:0.24


Consensus pattern (13 bp):   
AACCATCATATAC
Done.