Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga09g00132.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1747
ACGTcount: A:0.29, C:0.19, G:0.23, T:0.28


Found at i:1503 original size:6 final size:6

Alignment explanation


    Indices: 1492--1520  Score: 58
    Period size: 6  Copynumber: 4.8  Consensus size: 6

       1482 CGGAGAAATT

                                             
       1492 ATTATG ATTATG ATTATG ATTATG ATTAT
          1 ATTATG ATTATG ATTATG ATTATG ATTAT

       1521 TTTTGATAGA


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   23  1.00

ACGTcount: A:0.34, C:0.00, G:0.14, T:0.52


Consensus pattern (6 bp):   
ATTATG

Done.