Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga09g00192.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2415
ACGTcount: A:0.27, C:0.20, G:0.24, T:0.29


Found at i:180 original size:6 final size:6

Alignment explanation


    Indices: 169--208  Score: 80
    Period size: 6  Copynumber: 6.7  Consensus size: 6

        159 CGCCGTCGAT

                                                          
        169 AACCGC AACCGC AACCGC AACCGC AACCGC AACCGC AACC
          1 AACCGC AACCGC AACCGC AACCGC AACCGC AACCGC AACC

        209 ATCGCCTCCG


Statistics
Matches: 34,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   34  1.00

ACGTcount: A:0.35, C:0.50, G:0.15, T:0.00


Consensus pattern (6 bp):   
AACCGC

Done.