Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga09g00296.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4829
ACGTcount: A:0.29, C:0.21, G:0.18, T:0.32


Found at i:4476 original size:3 final size:3

Alignment explanation


    Indices: 4468--4495  Score: 56
    Period size: 3  Copynumber: 9.3  Consensus size: 3

       4458 CAGCTTGGTC

                                                 
       4468 CTT CTT CTT CTT CTT CTT CTT CTT CTT C
          1 CTT CTT CTT CTT CTT CTT CTT CTT CTT C

       4496 ATCGTTTTCT


Statistics
Matches: 25,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   25  1.00

ACGTcount: A:0.00, C:0.36, G:0.00, T:0.64


Consensus pattern (3 bp):   
CTT

Done.