Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga09g00383.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2751
ACGTcount: A:0.28, C:0.18, G:0.21, T:0.32


Found at i:304 original size:4 final size:4

Alignment explanation


    Indices: 295--337  Score: 86
    Period size: 4  Copynumber: 10.8  Consensus size: 4

        285 ACGGTTTCTT

                                                                 
        295 TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TAT
          1 TATC TATC TATC TATC TATC TATC TATC TATC TATC TATC TAT

        338 ATGTTTATAT


Statistics
Matches: 39,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   4   39  1.00

ACGTcount: A:0.26, C:0.23, G:0.00, T:0.51


Consensus pattern (4 bp):   
TATC

Done.