Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga09g01675.F3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3600
ACGTcount: A:0.26, C:0.17, G:0.22, T:0.36


Found at i:3193 original size:14 final size:14

Alignment explanation


    Indices: 3174--3202  Score: 58
    Period size: 14  Copynumber: 2.1  Consensus size: 14

       3164 TTGTTTCTCA

                          
       3174 CTGTCATATGCTAC
          1 CTGTCATATGCTAC

                          
       3188 CTGTCATATGCTAC
          1 CTGTCATATGCTAC

             
       3202 C
          1 C

       3203 AACATTCTGT


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   15  1.00

ACGTcount: A:0.21, C:0.31, G:0.14, T:0.34


Consensus pattern (14 bp):   
CTGTCATATGCTAC
Done.