Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga09g01773.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1973
ACGTcount: A:0.24, C:0.21, G:0.25, T:0.30


Found at i:1114 original size:3 final size:3

Alignment explanation


    Indices: 1106--1141  Score: 63
    Period size: 3  Copynumber: 12.0  Consensus size: 3

       1096 GGCCCCCTCT

                                                    *      
       1106 GCA GCA GCA GCA GCA GCA GCA GCA GCA GCA ACA GCA
          1 GCA GCA GCA GCA GCA GCA GCA GCA GCA GCA GCA GCA

       1142 ACCCCAGCCA


Statistics
Matches: 31,  Mismatches: 2, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
   3   31  1.00

ACGTcount: A:0.36, C:0.33, G:0.31, T:0.00


Consensus pattern (3 bp):   
GCA

Done.