Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga09g01810.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 663

Length: 1105
ACGTcount: A:0.29, C:0.17, G:0.22, T:0.31


Found at i:76 original size:6 final size:6

Alignment explanation


    Indices: 67--96  Score: 60
    Period size: 6  Copynumber: 5.0  Consensus size: 6

         57 CTAAAAGGAA

                                              
         67 AAAAAT AAAAAT AAAAAT AAAAAT AAAAAT
          1 AAAAAT AAAAAT AAAAAT AAAAAT AAAAAT

         97 GGACATAGCA


Statistics
Matches: 24,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   24  1.00

ACGTcount: A:0.83, C:0.00, G:0.00, T:0.17


Consensus pattern (6 bp):   
AAAAAT

Done.