Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga09g02286.N4

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 340

Length: 567
ACGTcount: A:0.31, C:0.15, G:0.20, T:0.34


Found at i:347 original size:6 final size:6

Alignment explanation


    Indices: 336--372  Score: 74
    Period size: 6  Copynumber: 6.2  Consensus size: 6

        326 CGTAATTCAC

                                                       
        336 CATCTT CATCTT CATCTT CATCTT CATCTT CATCTT C
          1 CATCTT CATCTT CATCTT CATCTT CATCTT CATCTT C

        373 TTCTAAGAAG


Statistics
Matches: 31,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   31  1.00

ACGTcount: A:0.16, C:0.35, G:0.00, T:0.49


Consensus pattern (6 bp):   
CATCTT

Done.