Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga09g02321.F6

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3911
ACGTcount: A:0.27, C:0.19, G:0.20, T:0.34


Found at i:2603 original size:6 final size:6

Alignment explanation


    Indices: 2592--2620  Score: 58
    Period size: 6  Copynumber: 4.8  Consensus size: 6

       2582 GCAGTATATA

                                             
       2592 TTTTTC TTTTTC TTTTTC TTTTTC TTTTT
          1 TTTTTC TTTTTC TTTTTC TTTTTC TTTTT

       2621 TACGATATTT


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   23  1.00

ACGTcount: A:0.00, C:0.14, G:0.00, T:0.86


Consensus pattern (6 bp):   
TTTTTC

Done.