Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga09g02385.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 541

Length: 903
ACGTcount: A:0.27, C:0.18, G:0.20, T:0.35


Found at i:27 original size:6 final size:6

Alignment explanation


    Indices: 16--43  Score: 56
    Period size: 6  Copynumber: 4.7  Consensus size: 6

          6 TTATAACAGA

                                            
         16 TCCCCT TCCCCT TCCCCT TCCCCT TCCC
          1 TCCCCT TCCCCT TCCCCT TCCCCT TCCC

         44 ATTCTCGTAC


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   22  1.00

ACGTcount: A:0.00, C:0.68, G:0.00, T:0.32


Consensus pattern (6 bp):   
TCCCCT

Done.