Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga01g02328.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 873

Length: 1456
ACGTcount: A:0.27, C:0.16, G:0.26, T:0.31


Found at i:1392 original size:6 final size:6

Alignment explanation


    Indices: 1381--1407  Score: 54
    Period size: 6  Copynumber: 4.5  Consensus size: 6

       1371 ATATATCTGA

                                           
       1381 TTTTGG TTTTGG TTTTGG TTTTGG TTT
          1 TTTTGG TTTTGG TTTTGG TTTTGG TTT

       1408 GTATTGGAGG


Statistics
Matches: 21,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   21  1.00

ACGTcount: A:0.00, C:0.00, G:0.30, T:0.70


Consensus pattern (6 bp):   
TTTTGG

Done.