Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga09g02520.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 721

Length: 1202
ACGTcount: A:0.32, C:0.19, G:0.18, T:0.31


Found at i:81 original size:3 final size:3

Alignment explanation


    Indices: 73--101  Score: 58
    Period size: 3  Copynumber: 9.7  Consensus size: 3

         63 ATTTATCTCT

                                                  
         73 ATC ATC ATC ATC ATC ATC ATC ATC ATC AT
          1 ATC ATC ATC ATC ATC ATC ATC ATC ATC AT

        102 ATATATAGTT


Statistics
Matches: 26,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   26  1.00

ACGTcount: A:0.34, C:0.31, G:0.00, T:0.34


Consensus pattern (3 bp):   
ATC

Done.