Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g00244.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 836

Length: 1394
ACGTcount: A:0.30, C:0.18, G:0.16, T:0.36


Found at i:615 original size:4 final size:4

Alignment explanation


    Indices: 608--647  Score: 80
    Period size: 4  Copynumber: 10.0  Consensus size: 4

        598 GGATGTCATT

                                                             
        608 CATA CATA CATA CATA CATA CATA CATA CATA CATA CATA
          1 CATA CATA CATA CATA CATA CATA CATA CATA CATA CATA

        648 TAATCTAATT


Statistics
Matches: 36,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   4   36  1.00

ACGTcount: A:0.50, C:0.25, G:0.00, T:0.25


Consensus pattern (4 bp):   
CATA

Done.