Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g00373.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 583

Length: 972
ACGTcount: A:0.26, C:0.22, G:0.23, T:0.29


Found at i:920 original size:22 final size:22

Alignment explanation


    Indices: 892--937  Score: 92
    Period size: 22  Copynumber: 2.1  Consensus size: 22

        882 AATTGATTTA

                                  
        892 TTCTTTAAGTGATACGCCATTG
          1 TTCTTTAAGTGATACGCCATTG

                                  
        914 TTCTTTAAGTGATACGCCATTG
          1 TTCTTTAAGTGATACGCCATTG

              
        936 TT
          1 TT

        938 GTTCTGTAAT


Statistics
Matches: 24,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  22   24  1.00

ACGTcount: A:0.22, C:0.17, G:0.17, T:0.43


Consensus pattern (22 bp):   
TTCTTTAAGTGATACGCCATTG
Done.