Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g00556.F3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 638

Length: 1064
ACGTcount: A:0.27, C:0.19, G:0.23, T:0.31


Found at i:38 original size:11 final size:9

Alignment explanation


    Indices: 15--44  Score: 60
    Period size: 9  Copynumber: 3.3  Consensus size: 9

          5 ACTTGTTCCA

                     
         15 TCTCTCTTT
          1 TCTCTCTTT

                     
         24 TCTCTCTTT
          1 TCTCTCTTT

                     
         33 TCTCTCTTT
          1 TCTCTCTTT

               
         42 TCT
          1 TCT

         45 GCGAGGTACT


Statistics
Matches: 21,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   9   21  1.00

ACGTcount: A:0.00, C:0.33, G:0.00, T:0.67


Consensus pattern (9 bp):   
TCTCTCTTT
Done.